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Genetic diversity and demographic history of the terrestrial hermit crabs Birgus latroand Coenobita brevimanusin the North-Western Pacific Region

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We evaluated the genetic diversity and demographic history of the terrestrial hermit crabs Birgus latroand Coenobita brevimanususing mtDNA COI sequence data (573 bp). Tissue samples from 163 individuals of B. latroand 63 individuals of C. brevimanuswere collected at 11 and four localities in the North-Western Pacific Region, respectively. Haplotype diversity was high and similar in B. latro(0.8809) and C. brevimanus(0.9222). Nucleotide diversity was higher in C. brevimanus(0.01088) than in B. latro(0.00404). No genealogical structure was observed in haplotypes of B. latrowhereas four haplotype clades were found in C. brevimanus. Weak but significant genetic population structure with the isolation by distance was detected in B. latro, but no genetic population structure was observed in C. brevimanus, likely because of the small number of sampling localities for the latter. Demographic history analyses suggested that B. latroand C. brevimanushad different histories of population expansion. Birgus latroexperienced population expansion once during the glacial period when sea levels were relatively lower in the late Pleistocene. Conversely, it was inferred that haplotype clades of C. brevimanusdiverged during or near the interglacial period when sea levels were relatively higher, and their population expansion and remixing occurred through the glacial periods in the late Pleistocene.

Affiliations: 1: 1Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology, Konan, Minato, Tokyo 108-8477, Japan; 2: 2Research Centre for Marine Invertebrate, National Research Institute of Fisheries and Environment of Inland Sea, Fisheries Research Agency, Onomichi, Hiroshima 722-0061, Japan

10.1163/1937240X-00002370
/content/journals/10.1163/1937240x-00002370
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1. Amesbury S. S. 1980. Biological studies on the coconut crab ( Birgus latro) in the Mariana Islands. University of Guam Marine Laboratory Technical Report 66: 1-39.
2. Bandelt H.-J. , Foster P. , Röhl A. . 1999. "Median-joining networks inferring intraspecific phylogenies". Molecular Biology and Evolution Vol 16: 37- 48. [Crossref]
3. Baums I. B. , Godwin L. S. , Franklin E. C. , Carlon D. B. , Toonen R. J. . 2014. "Discordant population expansions in four species of coral-associated Pacific hermit crabs (Anomura: Diogenidae) linked to habitat availability resulting from sea-level change". Journal of Biogeography Vol 41: 339- 352. [Crossref]
4. Benjamini Y. , Hochberg Y. . 1995. "Controlling the false discovery rate: a practical and powerful approach to multiple testing". Journal of the Royal Statistical Society Series B (Methodological) Vol 57: 289- 300.
5. Brachen-Grissom H. D. , Cannon M. E. , Cabezas P. , Feldmann R. M. , Schweitzer C. E. , Ahyong S. T. , Felder D. L. , Lemaitre R. , Crandall L. A. . 2013. "A comprehensive and integrative reconstruction of evolutionary history for Anomura (Crustacea: Decapoda)". BMC Evolutionary Biology Vol 13: 128.
6. Brodie R. J. 1999. "Ontogeny of shell-related behaviors and transition to land in the terrestrial hermit crab Coenobita compressusH. Milne Edwards". Journal of Experimental Marine Biology and Ecology Vol 241: 67- 80. [Crossref]
7. Brower A. Z. 1994. "Rapid morphological radiation and convergence among races of the butterfly Heliconius erratainferred from patterns of mitochondrial DNA evaluation". Proceedings of the National Academy of Sciences of the United States of America Vol 91: 6491- 6495. [Crossref]
8. Brown I. W. , Fielder D. R. . 1991. "Project overview and literature survey", pp.  1- 11. In, Brown I. W. , Fielder D. R. (eds.), The Coconut Crab: Aspects of Birgus latroBiology and Ecology in Vanuatu. ACIAR Monograph No. 8. Australian Centre for International Agricultural Research, Canberra, ACT.
9. Dana J. D. 1851. "Conspectus crustaceorum quae in orbis terrarium circumnavi gatione, Carolo Wilkes e classe reipublicae foederatae duce, lexit et descripsit". (Preprint from) Proceedings of the Academy of Natural Sciences, Philadelphia Vol 5: 267- 272.
10. Dana J. D. . 1852. Crustacea. Part I. United States Exploring Expedition During the Years 1838, 1839, 1840, 1841, 1842, under the Command of Charles Wilkes, U.S.N. Vol Vol. 13. C. Sherman, Philadelphia, PA.
11. de Wilde P. A. W. J. 1973. "On the ecology of Coenobita clypeatusin Curacao with reference to reproduction, water economy and osmoregulation in terrestrial hermit crabs". Studies on the Fauna of Curacao and Other Caribbean Islands Vol 144: 1- 138.
12. Drew M. M. , Harzsch S. , Stensmyr M. , Erland S. , Hansson B. S. . 2010. "A review of the biology and ecology of the robber crab, Birgus latro(Linnaeus, 1767) (Anomura: Coenobitidae)". Zoologischer Anzeiger Vol 249: 45- 67. [Crossref]
13. Eldredge L. G. 1996. Birgus latro. In: IUCN (2013) IUCN red list of threatened species, avaialbe online at . IUCN, Gland.
14. Excoffier L. , Lischer H. E. L. . 2010. "Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows". Molecular Ecology Resources Vol 10: 564- 567. [Crossref]
15. Excoffier L. , Smouse P. , Quattro J. . 1992. "Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data". Genetics Vol 131: 479- 491.
16. Felsenstein J. 1981. "Evolutionary trees from DNA sequences: a maximum likelihood approach". Journal of Molecular Evolution Vol 17: 368- 376. [Crossref]
17. Felsenstein J. . 1985. "Confidence limits on phylogenies: an approach using the bootstrap". Evolution Vol 39: 783- 791. [Crossref]
18. Fletcher W. J. 1993. "Coconut crabs", pp.  643- 681. In, Wright A. , Hill L. (eds.), Nearshore Marine Resources of the South Pacific. Institute of Pacific Studies, University of the South Pacific, Suva.
19. Fletcher W. J. , Brown I. W. , Fielder D. R. . 1990. "Growth of the coconut crab Birgus latroin Vanuatu". Journal of Experimental Marine Biology and Ecology Vol 141: 63- 78. [Crossref]
20. Folmer O. , Black M. , Hoeh W. , Lutz R. , Vrijenhoek R. . 1994. "DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates". Molecular Marine Biology and Biotechnology Vol 3: 294- 299.
21. Forskål P. 1775. Descriptiones Animalium Avium, Amphibiorum, Piscium, Insectorum, Vermium; quæ in Itinere Orientali Observavit Petrus Forskål. Mölleri, Hauniæ.
22. Fu Y.-X. 1997. "Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection". Genetics Vol 147: 915- 925.
23. Gopurenko D. , Hughes J. M. , Keenan C. P. . 1999. "Mitochondrial DNA evidence for rapid colonisation of the Indo-West Pacific by the mudcrab Scylla serrata ". Marine Biology Vol 134: 227- 233. [Crossref]
24. Guindon S. , Gascuel O. . 2003. "A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood". Systematic Biology Vol 52: 696- 704. [Crossref]
25. Hamasaki K. , Ishiyama N. , Kitada S. . 2015a. "Settlement behavior and substrate preference of the coconut crab Birgus latromegalopae on natural substrata in the laboratory". Journal of Experimental Marine Biology and Ecology Vol 468: 21- 28. [Crossref]
26. Hamasaki K. , Ishiyama N. , Yamashita S. , Kitada S. . 2014a. "Survival and growth of juveniles of the coconut crab Birgus latrounder laboratory conditions: implications for mass production of juveniles". Journal of Crustacean Biology Vol 34: 309- 318. [Crossref]
27. Hamasaki K. , Kato S. , Hatta S. , Murakami Y. , Dan S. , Kitada S. . 2014b. "Larval development and emigration behaviour during sea-to-land transition of the land hermit crab Coenobita brevimanusDana, 1852 (Crustacea: Decapoda: Anomura: Coenobitidae) under laboratory conditions". Journal of Natural History Vol 48: 1061- 1084. [Crossref]
28. Hamasaki K. , Kato S. , Murakami Y. , Dan S. , Kitada S. . 2015b. "Larval growth, development and duration in terrestrial hermit crabs". Sexuality and Early Development in Aquatic Organisms Vol 1: 93- 107. [Crossref]
29. Hamasaki K. , Sugizaki M. , Dan S. , Kitada S. . 2009. "Effect of temperature on survival and developmental period of coconut crab ( Birgus latro) larvae reared in the laboratory". Aquaculture Vol 292: 259- 263. [Crossref]
30. Hamasaki K. , Sugizaki M. , Sugimoto A. , Murakami Y. , Kitada S. . 2011. "Emigration behaviour during sea-to-land transition of the coconut crab Birgus latro: effects of gastropod shells, substrata, shelters and humidity". Journal of Experimental Marine Biology and Ecology Vol 403: 81- 89. [Crossref]
31. Harpending H. C. 1994. "Signature of ancient population growth in a low resolution mitochondrial DNA mismatch distribution". Human Biology Vol 66: 591- 600.
32. Hartnoll R. G. 1988. "Evolution, systematic, and geographical distribution", pp.  6- 54. In, Burggren W. W. , McMahon B. R. (eds.), Biology of the Land Crabs. Cambridge University Press, New York, NY. [Crossref]
33. Harvey A. W. 1992. "Abbreviated larval development in the Australian terrestrial hermit crab Coenobita variabilisMcCulloch (Anomura: Coenobitidae)". Journal of Crustacean Biology Vol 12: 196- 209. [Crossref]
34. Hayward B. W. , Scott G. H. , Crundwell M. P. , Kennett J. P. , Carter L. , Neil H. L. , Sabaa A. T. , Wilson K. , Rodger J. S. , Schaefer G. , Grenfell H. R. , Li Q. . 2008. "The effect of submerged plateaux on Pleistocene gyral circulation and sea-surface temperatures in the Southwest Pacific". Global and Planetary Change Vol 63: 309- 316. [Crossref]
35. Hazlett B. A. , Provenzano A. J. Jr. 1965. "Development of behaviour in laboratory reared hermit crabs". Bulletin of Marine Science Vol 15: 616- 633.
36. Held C. , Koenemann S. , Schubart C. D. . 2011. Phylogeography and Population Genetics in Crustacea. Crustacean Issues 19. CRC Press, Boca Raton, FL.
37. Hijmans R. J. 2015. geosphere: Spherical Trigonometry. R package version 1.3-13, available online at http://CRAN.R-project.org/package=geosphere. R Foundation for Statistical Computing, Vienna.
38. Kimura M. 1980. "A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences". Journal of Molecular Evolution Vol 16: 111- 120. [Crossref]
39. Lambeck K. , Esat T. M. , Potter E.-K. . 2002. "Links between climate and sea levels for the past three million years". Nature Vol 419: 199- 206. [Crossref]
40. Latreille P. A. 1804. "Tableau Méthodique des Crustacés. Classe Septième. Crustacés (1), Crustacea", pp.  123- 127. In, Nouveau Dictionnaire d’Histoire naturelle, appliquée aux arts, principalement à l’Agriculture et à l’Économie rurale et domestique: par une Société de Naturalistes et d’Agriculteurs: avec des figures tirées des trois Règnes de la Nature. Addition d’Articles connus pendant l’impresson de ce Dictionnaire. Vol Vol. 24. Deterville, Paris.
41. Latreille P. A. . 1829. "Crustacés, Arachnides et partie des Insects", pp.  1- 39. In, Cuvier G. (ed.), Le Règne Animal Distribué d’après son Organization, pour server de Base à l’histoire Naturelle des Animaux, et d’introduction a Ľanatomie Comparée. Deterville, Paris. [Crossref]
42. Lavery S. , Moritz C. , Fielder D. R. . 1995. "Changing patterns of population structure and gene flow at different spatial scales in Birgus latro(the coconut crab)". Heredity Vol 74: 531- 541. [Crossref]
43. Lavery S. , Moritz C. , Fielder D. R. . 1996a. "Indo-Pacific population structure and evolutionary history of the coconut crab Birgus latro ". Molecular Ecology Vol 5: 557- 570. [Crossref]
44. Lavery S. , Moritz C. , Fielder D. R. . 1996b. "Genetic patterns suggest exponential population growth in a declining species". Molecular Biology and Evolution Vol 13: 1106- 1113. [Crossref]
45. Leach W. E. 1816. "A tabular view of the external characters of four classes of animals, which Linné, arranged under Insecta; with the distribution of the genera composing three of these classes into orders &c., and descriptions of several new genera and species". Transactions of the Linnean Society of London Vol 11: 306- 400. [Crossref]
46. Librado P. , Rozas J. . 2009. "DnaSP v5: a software for comprehensive analysis of DNA polymorphism data". Bioinformatics Vol 25: 1451- 1452. [Crossref]
47. Linnaeus C. 1767. Systema Naturae per Regna Tria Naturae, Secundum Classes, Ordines, Genera, Species cum Characteribus, Differentiis, Synonymis, Locis (edit. 12). Vol Vol. 1. Laurentii Salvii, Holmiae [Stockholm].
48. Liu Y. , Liu R. , Ye L. , Liang J. , Xuan F. , Xu Q. . 2009. "Genetic differentiation between populations of swimming crab Portunus trituberculatusalong the coastal waters of the East China Sea". Hydrobiologia Vol 618: 125- 137. [Crossref]
49. Ludt W. B. , Rocha L. A. . 2015. "Shifting seas: the impacts of Pleistocene sea-level fluctuations on the evolution of tropical marine taxa". Journal of Biogeography Vol 42: 25- 38. [Crossref]
50. Mantel N. 1967. "The detection of disease clustering and a generalized regression approach". Cancer Research Vol 27: 209- 220.
51. McLaughlin P. A. , Komai T. , Lemaitre R. , Rahayu D. L. . 2010. "Annotated checklist of anomuran decapod crustaceans of the world (exclusive of the Kiwaoidea and families Chirostylidae and Galatheidae of the Galatheoidea) Part I – Lithodoidea, Lomisoidea and Paguroidea". The Raffles Bulletin of Zoology Vol 23( Supplement): 5- 107.
52. McMillen-Jackson A. L. , Bert T. M. . 2003. "Disparate patterns of population genetic structure and population history in two sympatric penaeid shrimp species ( Farfantepenaeus aztecusand Ltopenaeus setiferus) in the eastern United States". Molecular Ecology Vol 12: 2895- 2905. [Crossref]
53. Miers E. J. 1876. "Descriptions of some new species of Crustacea, chiefly from New Zealand". Annals and Magazine of Natural History, (4) Vol 17: 218- 229.
54. Mukai T. , Nakamura S. , Nishida M. . 2009. "Genetic population structure of a reef goby, Bathygobius cocosensis, in the northwestern Pacific". Ichthyological Research Vol 56: 380- 387. [Crossref]
55. Nakasone Y. 1988. "Land hermit crabs from the Ryukyus, Japan, with a description of a new species from the Philippines (Crustacea, Decapoda, Coenobitidae)". Zoological Science Vol 5: 165- 178.
56. Nakasone Y. . 2001. "Reproductive biology of three land hermit crabs (Decapoda: Anomura: Coenobitidae) in Okinawa, Japan". Pacific Science Vol 55: 157- 169. [Crossref]
57. Naro-Maciel E. , Reid B. , Holmes K. E. , Brumbaugh D. R. , Martin M. , DeSalle R. . 2011. "Mitochondrial DNA sequence variation in spiny lobster: population expansion, panmixia, and divergence". Marine Biology Vol 158: 2027- 2041. [Crossref]
58. Nei M. 1987. Molecular Evolutionary Genetics. Columbia University Press, New York, NY.
59. Nei M. , Li W. H. . 1979. "Mathematical model for studying genetic variation in terms of restriction endonucleases". Proceedings of the National Academy of Sciences of the United States of America Vol 76: 5269- 5273. [Crossref]
60. Oksanen J. , Blanchet F. G. , Kindt R. , Legendre P. , Minchin P. R. , O’Hara R. B. , Simpson G. L. , Solymos P. , Stevens M. H. H. , Wagner H. . 2015. vegan: Community Ecology Package. R package version 2.2-1, available online at http://CRAN.R-project.org/package=vegan. R Foundation for Statistical Computing, Vienna.
61. Palumbi S. R. 2003. "Population genetics, demographic connectivity, and the design of marine reserves". Ecological Applications Vol 13: S146- S158. [Crossref]
62. Posada D. 2008. "jModelTest: phylogenetic model averaging". Molecular Biology and Evolution Vol 25: 1253- 1256. [Crossref]
63. Posada D. , Buckley T. R. . 2004. "Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests". Systematic Biology Vol 53: 793- 808. [Crossref]
64. R Core Team. 2014. R: a Language and Environment for Statistical Computing, available online at http://www.R-project.org/. R Foundation for Statistical Computing, Vienna.
65. Rathbun M. J. 1896. "Description of a new genus and four new species of crabs from the West Indies". Proceedings of the United States National Museum Vol 19( 1104): 141- 144. [Crossref]
66. Reese E. S. 1962. "Shell selection behaviour of hermit crabs". Animal Behaviour Vol 10: 347- 360. [Crossref]
67. Reese E. S. . 1968. "Shell use: an adaptation for emigration from the sea by the coconut crab". Science Vol 161: 385- 386. [Crossref]
68. Rogers A. R. 1995. "Genetic evidence for a Pleistocene population explosion". Evolution Vol 49: 608- 615. [Crossref]
69. Rogers A. R. , Harpending H. . 1992. "Population growth makes waves in the distribution of pairwise genetic differences". Molecular Biology and Evolution Vol 9: 552- 569.
70. Rohling E. J. , Fenton M. , Jorissen F. J. , Bertrand P. , Ganssen G. , Caulet J. P. . 1998. "Magnitudes of sea-level lowstands of the past 500,000 years". Nature Vol 394: 162- 165. [Crossref]
71. Saitou N. , Nei M. . 1987. "The neighbour-joining method: a new method for reconstructing phylogenetic trees". Molecular Biology and Evolution Vol 4: 406- 425.
72. Sato T. , Yoseda K. . 2008. "Reproductive season and female maturity size of coconut crab Birgus latroin Hatoma Island, southern part of Japan". Fisheries Science Vol 74: 1277- 1282. [Crossref]
73. Sato T. , Yoseda K. , Abe O. , Shibuno T. , Takada Y. , Dan S. , Hamasaki K. . 2013. "Growth of the coconut crab Birgus latroestimated from mark-recapture using passive integrated transponder (PIT) tags". Aquatic Biology Vol 19: 143- 152. [Crossref]
74. Say T. 1817. "An account of the Crustacea of the United States". Journal of the Academy of Natural Sciences of Philadelphia 1(1): 57-63, 97-101, 155-169 (1817); 1(2): 235-253, 313-319, 374-401, 423-441 (1818).
75. Schiller C. , Fielder D. R. , Brown I. W. , Obed A. . 1991. "Reproduction, early life-history and recruitment", pp.  13- 35. In, Brown I. W. , Fielder D. R. (eds.), The Coconut Crab: Aspects of Birgus latroBiology and Ecology in Vanuatu. ACIAR Monograph No. 8. Australian Centre for International Agricultural Research, Canberra, ACT.
76. Schneider S. , Excoffier L. . 1999. "Estimation of demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: application to human mitochondrial DNA". Genetics Vol 152: 1079- 1089.
77. Schubart C. D. , Diesel R. , Hedges S. B. . 1998. "Rapid evolution to terrestrial life in Jamaican crabs". Nature Vol 393: 363- 365. [Crossref]
78. Schwartz M. K. , Luikart G. , Waples R. S. . 2007. "Genetic monitoring as a promising tool for conservation and management". TRENDS in Ecology and Evolution Vol 22: 25- 33. [Crossref]
79. Schwarz G. 1978. "Estimating the dimension of a model". The Annals of Statistics Vol 6: 461- 464. [Crossref]
80. Tajima F. 1983. "Evolutionary relationship of DNA sequences in finite populations". Genetics Vol 105: 437- 460.
81. Tajima F. . 1989. "Statistical method for testing the neutral mutation hypothesis by DNA polymorphism". Genetics Vol 123: 585- 595.
82. Tamura K. 1992. "Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G + C content biases". Molecular Biology and Evolution Vol 9: 678- 687.
83. Tamura K. , Nei M. . 1993. "Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees". Molecular Biology and Evolution Vol 10: 512- 526.
84. Tamura K. , Stecher G. , Peterson D. , Filipski A. , Kumar S. . 2013. "MEGA6: Molecular Evolutionary Genetics Analysis version 6.0". Molecular Biology and Evolution Vol 30: 2725- 2729. [Crossref]
85. Thompson J. D. , Gibson T. J. , Plewniak F. , Jeanmougin F. , Higgins D. G. . 1997. "The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools". Nucleic Acids Research Vol 24: 4876- 4882. [Crossref]
86. Yang Z. 1993. "Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites". Molecular Biology and Evolution Vol 10: 1396- 1401.
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